<p>1. Rice Artificial Hybridization for Genetic Analysis</p><p> Xueyan Sha</p><p> </p><p>2. Fluorescence In Situ Hybridization Techniques for Cytogenetic and Genomic Analyses</p><p> Jason G. Walling, Wenli Zhang, and Jiming Jiang</p><p> </p><p>3. Generation of Rice Mutants by Chemical Mutagenesis</p><p> Thomas H. Tai</p><p> </p><p>4. TILLING and Ecotilling for Rice</p><p> Jennifer L. Cooper, Steven Henikoff, Luca Comai, and Bradley J. Till</p><p> </p><p>5. Functional Characterization of Rice Genes Using a Gene-Indexed T-DNA Insertional Mutant Population</p><p> Ki-Hong Jung and Gynheung An</p><p> </p><p>6. QTL Analysis and Map-Based Cloning of Salt Tolerance Gene in Rice</p><p> Ji-Ping Gao and Hong-Xuan Lin</p><p> </p><p>7. Site-Specific Gene Integration in Rice</p><p> Vibha Srivastava</p><p> </p><p>8. Transcriptome Profiling Analysis Using Rice Oligonucleotide Microarrays</p><p> Ki-Hong Jung and Pamela C. Ronald</p><p> </p><p>9. Cloning of Small RNAs for the Discovery of Novel MicroRNAs in Rice</p><p> Guru Jagadeeswaran and Ramanjulu Sunkar</p><p> </p><p>10. Global Identification of Small RNA Targets in Rice by Sequencing Sliced Ends of Messenger RNAs</p><p> Yong-Fang Li and Ramanjulu Sunkar</p><p> </p><p>11. Artificial MicroRNAs for Specific Gene Silencing in Rice</p><p> Norman Warthmann, Stephan Ossowski, Rebecca Schwab, and Detlef Weigel</p><p> </p><p>12. Rice Proteomic Analysis: Sample Preparation to Protein Identification</p><p> Ganesh Kumar Agrawal, Nam-Soo Jwa, Young-Ho Jung, Sun Tae Kim, Dea-Wook Kim, Kyoungwon Cho, Junko Shibato, and Randeep Rakwal</p><p> </p><p>13. Quantification of Jasmonic and Salicylic Acids in Rice Seedling Leaves</p><p> Kyoungwon Cho, Oksoo Han, Shigeru Tamogami, Junko Shibato, Akihiro Kubo, Ganesh Kumar Agrawal, and Randeep Rakwal</p><p> </p><p>14. Analysis of Insect-Induced Volatiles from Rice</p><p> Nan Zhao, Xiaofeng Zhuang, Gitika Shrivastava, and Feng Chen</p><p> </p><p>15. Phenotypic and Physiological Evaluation for Drought and Salinity Stress Responses in Rice</p><p> Utlwang Batlang, Niranjan Baisakh, Madana M.R. Ambavaram, and Andy Pereira</p><p> </p><p>16. Phenotypic, Physiological, and Molecular Evaluation of Rice Chilling Stress Response at the Vegetative Stage</p><p> Benildo G. de los Reyes, Song Joong Yun, Venura Herath, Fuyu Xu, Myoung Ryoul Park, Jeong Il Lee, and Ki Young Kim</p><p> </p><p>17. Analysis of Rice Root Hair Morphology Using Cryo-Scanning Electron Microscopy</p><p> Zhiming Yu, Hanmin Chen, Yanli Tong, and Ping Wu</p><p> </p><p>18. Inoculation and Virulence Assay for Bacterial Blight and Bacterial Leaf Streak of Rice</p><p> Bing Yang and Adam Bogdanove</p><p> </p><p>19. Inoculation and Scoring Methods for Rice Sheath Blight Disease</p><p> Yulin Jia, Guangjie Liu, Dong-Soo Park, and Yinong Yang</p><p> </p><p>20. Molecular Approaches to Improve Rice Abiotic Stress Tolerance</p><p> Junya Mizoi and Kazuko Yamaguchi-Shinozaki</p><p> </p><p>21. Molecular Strategies to Improve Rice Disease Resistance</p><p> Emily E. Helliwell and Yinong Yang</p><p> </p><p>22. Molecular Strategies to Engineer Transgenic Rice Seed Compartments for Large-Scale Production of Plant-Made Pharmaceuticals</p><p> Trevor Greenham and Illimar Altosaar</p><p> </p><p> </p><p>Appendix: Genomic and Bioinformatic Resources for Rice Research</p><p> Wenhua Liu, Kabin Xie, and Yinong Yang</p><p><p><p><p><p><p><p><p><p><p><p><p><p><p><p><p><p><p><p><p><p><p> Vibha Srivastava</p>