Plant Transcription Factors

<p><p><p><p>Section I. Introduction</p><p>1.  MADS &amp; More: Transcription Factors that Shape the Plant</p><p>            Rainer Melzer and Günter Theißen</p><p>Section II. Identification of Transcription Factors</p><p>2. In Silico Mining and PCR Based Approaches to Transcription Factor Discovery in Non-Model Plants: Gene Discovery of the WRKY Transcription Factors in Conifers</p><p>            Jun-Jun Liu and Yu Xiang</p><p>3. Isolation of Plant Transcription Factors Using a Yeast One-Hybrid System</p><p>            Tatiana Pyvovarenko and Sergiy Lopato</p><p>4. A Transposon Based Activation Tagging System for Gene Function Discovery in Arabidopsis</p><p>            Nayelli Marsch-Martínez</p><p>Section III. Functional Verification</p><p><p>5. CRES-T, An Effective Gene Silencing System Utilizing Chimeric Repressors</p><p>            Nobutaka Mitsuda, Kyoko Matsui, Miho Ikeda, Masaru Nakata, Yoshimi Ooshima, Yukari Nagatoshi, and Masaru Ohme-Takagi</p><p>6. Analysis of a Transcription Factor Using Transient Assay in Arabidopsis Protoplasts</p><p>            Yuji Iwata, Mi-Hyun Lee, and Nozomu Koizumi</p><p>7. Microarray-Based Identification of Transcription Factor Target Genes</p><p>            Maartje Gorte, Anneke Horstman, Robert B. Page, Renze Heidstra, Arnold Stromberg, and Kim Boutilier</p><p><p><p><p>Section IV. Protein-Protein Interaction and Other Means for Activity Control</p><p>8. Yeast Protein-Protein Interaction Assays and Screens</p><p>            Stefan de Folter and Richard G.H. Immink </p><p>9. Mapping Functional Domains of transcription factors</p><p>            Ling Zhu and Enamul Huq</p><p>10. Bimolecular fluorescence complementation as a tool to study interactions of regulatory proteins in plant protoplasts</p><p>            Sitakanta Pattanaik, Joshua R. Werkman, and Ling Yuan</p><p>11. Isolation of transcription factor complexes from Arabidopsis cell suspension cultures by tandem affinity purification</p><p>            Jelle Van Leene, Dominique Eeckhout, Geert Persiau, Eveline Van De Slijke, Jan Geerinck, Gert Van Isterdael, Erwin Witters, and Geert De Jaeger</p><p><p>12. Assaying Transcription Factor Stability</p><p>            Jasmina Kurepa and Jan A. Smalle</p><p>13. How to assess the intercellular trafficking of transcription factors</p><p>            Munawar Ahmad, Won Kyong Cho, Yeonggil Rim, Lijun Huang, and Jae-Yean Kim</p><p>Section V. Protein-DNA Interaction</p><p>14. SELEX (Systematic Evolution of Ligands by EXponential Enrichment), as a powerful tool for deciphering the protein-DNA interaction space</p><p>            Chenglin Chai, Zidian Xie, and Erich Grotewold</p><p>15. Footprinting and Missing Nucleoside Analysis of Transcription Factor-DNA Complexes </p><p>            Ivana L. Viola and Daniel H. Gonzalez</p><p>16. Chromatin immunoprecipitation to verify or to identify In Vivo protein-DNA interactions</p><p>            Yumei Zheng and Sharyn E. Perry</p><p>17. Visualizing and characterizing In Vivo DNA-Binding Events and Direct Target Genes of Plant Transcription Factors </p><p>            Jose M. Muiño, Gerco C. Angenent, and Kerstin Kaufmann</p><p><p>18. Mapping In Vivo Protein-DNA Interactions in Plants by DamID, a DNA Adenine Methylation-Based Method </p><p>            Sophie Germann  and Valérie Gaudin</p><p>Section VI. Engineering Metablolic Pathways using Transcription Factors</p><p>19. Directed Evolution through DNA Shuffling for the Improvement and Understanding of Genes and Promoters</p><p>            Joshua R. Werkman, Sitakanta Pattanaik, and Ling Yuan</p><p> </p><p> </p><p> </p><p> </p><p> </p><p> </p><p> </p><p>            </p><p>