Gerardo Jimenez
Springer New York
e druk, 2016
9781493964222
ERK Signaling
Methods and Protocols
Specificaties
Gebonden, blz.
|
Engels
Springer New York |
e druk, 2016
ISBN13: 9781493964222
Rubricering
Onderdeel van serie
Methods in Molecular Biology
Verwachte levertijd ongeveer 9 werkdagen
Samenvatting
This volume provides a collection of techniques and approaches for the study of ERK signaling. It begins with a historical perspective of genetic and molecular discoveries, followed by chapters covering specific topics in a broad range of experimental systems, including in vitro assays of EGFR and ERK activities; proteomic and genome-wide analyses of ERK signaling targets; cell biological, genetic, quantitative and imaging approaches in cells and model organisms; and integrated mathematical modeling of the ERK pathway. Written in the highly successful Methods in Molecular Biology series format, chapters include introductions to their respective topics, lists of the necessary materials and reagents, step-by-step, readily reproducible laboratory protocols, and tips on troubleshooting and avoiding known pitfalls.
Cutting-edge and thorough, ERK Signaling: Methods and Protocols will aid and stimulate further advances in the vibrant field of ERK signaling.
Specificaties
ISBN13:9781493964222
Taal:Engels
Bindwijze:gebonden
Uitgever:Springer New York
Inhoudsopgave
<p>1. How Genetics has Helped Piece Together the MAPK Signaling Pathway<br>Dariel Ashton-Beaucage and Marc Therrien<br><br>2. In Vitro Enzyme Kinetics Analysis of EGFR<br>Zhihong Wang and Christine Candelora<br></p><div><br>3. High-Throughput Analysis of Mammalian Receptor Tyrosine Kinase Activation in Yeast Cells<br><div> Nobuo Yoshimoto and Shun’ichi Kuroda<br><br>4. Structural Studies of ERK2 Protein Complexes<br><div> Johannes F. Weijman, Stefan J. Riedl, and Peter D. Mace<br><div><br>5. Isolation and Characterization of Intrinsically Active (MEK-Independent) Mutants of Mpk1/Erk<br><div> Tal Goshen-Lago, Dganit Melamed, Arie Admon, and David Engelberg<br><div><br>6. Assaying Activation and Subcellular Localization of ERK in Cells and Tissues<br> Carme Caelles, Carles Bayod, and Melisa Morcillo<br><div><br>7. Detection and Functional Analysis of SUMO-Modified MEK<br><div> Yuji Kubota and Mutsuhiro Takekawa<br><br>8. Single-Step Affinity Purification of ERK Signaling Complexes Using the Streptavidin-Binding Peptide (SBP) Tag<br><div> Liu Yang and Alexey Veraksa<br><div><br>9. High-Throughput In Vitro Identification of Direct MAPK/Erk Substrates<br><div> Rona Grossman and Ze'ev Paroush<br><div><br>10. Global Identification of ERK Substrates by Phosphoproteomics Based on IMAC and 2D-DIGE<br><div> Hidetaka Kosako and Kou Motani<br><div><br>11. Analysis of Ras/ERK Compartmentalization by Subcellular Fractionation<br><div> Lorena Agudo–Ibañez, Piero Crespo, and Berta Casar<br><div><br>12. Cell-Based Assays to Study ERK Pathway/Caveolin1 Interactions<br><div> Raffaele Strippoli, Asier Echarri, Miguel Angel del Pozo<br><div><br>13. The Nuclear Translocation of ERK<br><div> Denise A. Berti and Rony Seger<br><div><br>14. Visualization of RAS/MAPK Signaling In Situ by the Proximity Ligation Assay (PLA)<br> Zijian Tang and Chengkai Dai<br><div><br>15. Measuring ERK Activity Dynamics in Single Living Cells Using FRET Biosensors<br><div> Yannick Blum, Rafael D. Fritz, Hyunryul Ryu, and Olivier Pertz<br><div><br>16. Quantifying Tensile Force and ERK Phosphorylation on Actin Stress Fibers<br><div> Hiroaki Hirata, Mukund Gupta, Sri Ram Krishna Vedula, Chwee Teck Lim, Benoit Ladoux, and Masahiro Sokabe<br><div><br>17. Co-Culture Activation of MAP Kinase in Drosophila S2 Cells<br><div> Josefa Steinhauer<br><div><br>18. Isolation of Mouse Embryonic Stem Cell Lines in the Study of ERK1/2 MAP Kinase Signaling<br><div> Marc K. Saba-El-Leil, Christophe Frémin, and Sylvain Meloche<br><div><br>19. 3D Organotypic Culture Model to Study Components of ERK Signaling<br><div> Athina-Myrto Chioni, Rabia Tayba Bajwa, and Richard Grose<br><div><br>20. Genetic Validation of Cell Proliferation via Ras-Independent Activation of the Raf/Mek/Erk Pathway<br><div> Carmen G. Lechuga, Lucía Simón-Carrasco, Harrys K.C. Jacob, and Matthias Drosten<br><div><br>21. Genome-Wide Analysis of RAS/ERK Signaling Targets<br><div> Joshua P. Plotnik and Peter C. Hollenhorst<br><div><br>22. Probing Chromatin Modifications in Response to ERK Signaling<br><div> Ozgur Oksuz and Wee-Wei Tee<br><div><br>23. Analyzing pERK Activation during Planarian Regeneration<br><div> Susanna Fraguas, Yoshihiko Umesono, Kiyokazu Agata, and Francesc Cebrià<div><br>24. Discovering Functional ERK Substrates Regulating Caenorhabditis elegans Germline Development<br><div> Jessica Jie Chen and Swathi Arur<br><div><br>25. Reconstructing ERK Signaling in the Drosophila Embryo from Fixed Images<br><div> Bomyi Lim, Carmeline J. Dsilva, Ioannis G. Kevrekidis, and Stanislav Y. Shvartsman<br><div><br>26. <Using CRISPR-Cas9 to Study ERK Signaling in Drosophila<br><div> Marta Forés, Aikaterini Papagianni, Laura Rodríguez-Muñoz, and Gerardo Jiménez<br><div></div></div></div></div></div></div></div></div></div></div></div></div></div></div></div></div></div></div></div></div></div></div></div></div></div></div></div></div></div></div></div></div></div></div></div></div></div></div></div></div></div></div></div></div></div><p></p><div>27. Analyzing ERK Signal Dynamics during Zebrafish Somitogenesis<br></div>Takaaki Matsui and Yasumasa Bessho<br><div><br>28. Modeling RASopathies with Genetically Modified Mouse Models<br><div> Isabel Hernández-Porras<sup> </sup>and Carmen Guerra<br><div><br>29. Dissecting Cell-Fate Determination through Integrated Mathematical Modeling of the ERK/MAPK Signaling Pathway<br><div> Sung-Young Shin and Lan K. Nguyen</div></div></div></div>